Wow, you guys are full of info!

So in regards to the Samurai's, you say they were .795 '86-'88 and .865 '88.5 - 95.... Did the Samurai's use 16 valve engines in 86-88 and go to 8 valve engines the later half of 88 (seems unlikley) or are you saying that the Samurai's tranny ratios are based off year only and engine has nothing to do with it?
Now, I am dealing with a 92 Tracker, 5 speed manual behind a 1.6 Liter Vin type U 8 valve engine. That would mean that my tranny ratio in 5th gear is .865, right?
So, here's the question-- setting ratios aside for a moment, WHICH 4x4 trannies are compat with my tracker first off. I assume obviously that a 4x4 tracker obviously. What years though. It seems 88-94 are all pretty similar as far as engine parts. Also what about Zuk or Sammy 4x4 trannies? Will one of those work just the same on my tracker?
The same question really goes for all my donor parts-- how interchangable am I, and with that years?
Also, let's say I find a salvage yard or some guy with a trackick tranny in his garage but they don't know where it came from. How can I determine the 5th speed ratio? Is there a serial number I can reference. Obviously I can't count gear teeth without looking inside it.
So many questions...

I will let you guys start with those. I feel like hittin Ebay to see what's out there tonight...
Sorry, I kinda got carried away with the info and added some that isn't real relevant to your situtation. Let me try to clear things up a bit.....
All 86-95 samurai's had a 1.3 8V engine. 86-89 were carbed. 90-95 were fuel injected.
Tranny ratios, therefore, are based off of year, and have nothing to do with the engine.
Your current tranny ratio in 5th is .86.
Any tracker or sidekick 4x4 tranny (89-98) is compatable with your engine (no matter whether it came from one with a 1.6L, 8V or a 1.6L, 16V engine....the blocks are the same). The only sidekick/tracker tranny that would not be a direct bolt up to your engine, would be the ones that came behind a select few 89 sidekicks that had a 1.3L, 8V, CARBED engine (these are very rare and highly unlikely you will ever see one in your life). FYI, 99.9% of trackicks have fuel injected engines.....either TBI (8V engines) or MPFI (16V engines).
No, samurai trannys are not directly swappable with trackick trannys. For one, the samurai's use a divorced tcase (not mounted directly on the back of the tranny, like on the trackicks). Secondly, the samurai bellhousing is not the same size as the trackicks, so an adapter will have to be used to mate a samurai tranny behind a trackick engine. Bottom line on samurai trannys....don't even bother to try to use one, in your situtation.
As mentioned, use the "put it in 5th gear and spin the input shaft and check to see how far the output shaft turns" method. For an .86 ratio, the input shaft will turn .86 revolutions for every one turn of the output shaft. For a .795 ratio, the input shaft will turn .795 revolutions for every one turn of the output shaft. There are no physical markings/differences in the different ratio trannys, that I am aware of, to verify which ratio 5th the tranny has.
Physically, the majority of drivetrain parts are interchangelable between the 89 thru 98 trackicks. There are some electrical type parts that are not. If you want to know about a specific part, just ask.
Hopefully, that cleared up some of the confusion.